Eran Elhaik

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Eran Elhaik
Born1980 (age 40–41)
NationalityIsraeli and American
Alma materUniversity of Houston
Scientific career
FieldsGenetics, bioinformatics, Population genetics
InstitutionsJohns Hopkins University, University of Sheffield, Lund University
Doctoral advisorDan Graur
Websitewww.eranelhaiklab.org

Eran Elhaik (born 1980) is an Israeli-American geneticist and bioinformatician, and an associate professor of bioinformatics at Lund University in Sweden. His research uses computational, statistical, epidemiological and mathematical approaches to fields such as complex disorders, population genetics, personalised medicine, molecular evolution, genomics, paleogenomics and epigenetics.[citation needed]

Career[]

After completing undergraduate studies in Israel, he obtained a PhD in molecular evolution under the supervision of Dan Graur at the University of Houston in 2009, followed by postdoctoral research fellowships at the Johns Hopkins University School of Medicine and School of Public Health. In 2011 the Genographic Project, after concerns emerged about the retention of private genetic data of individuals in surveyed populations, hired Elhaik and asked him to design a method that would enable analysts to extract only historical information from the accumulating genomic evidence of populations in such a way that individual's right to keep their private health profile was collected from individuals, without infringing their personal health data private.' [1] From 2014 to 2019 he worked at the University of Sheffield Department of Animal and Plant Sciences in the United Kingdom.[2] Since 2019 he has been an associate professor of bioinformatics at the Department of Biology at Lund University in Sweden.[3][4]

Research[]

In the field of molecular evolution, Elhaik worked on the compositional domain model that describes the compositional organization of animal genomes.[5]

In the field of complex disorders, he proposed that the allostatic load theory could be used to explain bipolar disorder[6] and Sudden infant death syndrome (SIDS).[7] According to this theory, the accumulation of perinatal and prenatal stressors has neurotoxic effects with consequences to one's health.

In the field of genetics, Elhaik was part of the team that designed the GenoChip microarray for the Genographic Project and their online tests.[8] He also contributed to the development of algorithms for data compression.[9] in earlier ancestry studies, modern paternal or maternal haplogroups were used to trace migrations in antiquity. Elhaik was diffident about the method, considereding it problematic 'since the modern frequencies of haplogroups do not represent the past very accurately.' To this end he developed his aGPS algorithm to establish place of origin with greater precision.[10]

In the field of population genetics, Elhaik has published papers analyzing the ancestries of European Jews[11][12][13] and Druze,[14][15] including work related to the Khazar hypothesis of Ashkenazi ancestry, a contentious subject that has received media attention.[16] Elhaik argues for a non-Levantine origin of the Ashkenazi and favours the hypothesis that they are of mixed Irano-Turko-Slavic and southern European descent.[17] Most of Elhaik's population genetic research uses the GPS (Geographic Population Structure) algorithm designed by him and co-authors.[18]

Elhaik himself initially contacted Harry Ostrer, who, along with most other scientists in the field, proposes that the Jews are genetically related and relatively homogeneous, in order to obtain permission to access the data basis used by Ostrer and his colleagues to establish their result. Ostrer was willing to share his data provided that Elhaik submit a proposal showing that the project met several criteria, including that it be "non-defamatory nature toward the Jewish people", which Elhaik viewed as evidence of bias and which pediatrician Catherine DeAngelis called "peculiar".[19]

Elhaik has said that while his paper "has attracted the attention of anti-Zionists and 'anti-Semitic white supremacists'", his intention was not to disprove a connection to biblical Jews, but rather "to eliminate the racist underpinnings of anti-Semitism in Europe".[19]

Reactions[]

The accuracy and reliability of Elhaik's population genetic theory of the Khazars met with strong criticism from a number of other geneticists,[20][21] as well as from linguists who took exception to his use of Paul Wexler's theories of Yiddish.[22]

In particular the validity of the proxy population used in his first Khazar paper was criticized on methodological grounds.[23][24][25][26][27][28][29][30] Marcus Feldman, director of Stanford’s Morrison Institute for Population and Resource Studies, has said that Elhaik is "just wrong", with regard to the Khazar hypothesis where, in Feldman's view, he "appears to be applying the statistics in a way that gives him different results from what everybody else has obtained from essentially similar data".[19] Elhaik has continued to publish work in peer-reviewed journals supporting and developing his research on questions regarding the ancestry of Jewish populations.[31] Elhaik's position is that that principal component analysis, employed to identify population structures and their ancestry, has serious flaws that generate erroneous results.[32]

In a 2015 overview of the issue of attempts to derive an inclusive genetic profile of all Jews, Raphael Falk, touching on Elhaik's contribution to the argument in 2013, wrote:

The findings support the hypothesis that posits that European Jews are comprised of Caucasus, European, and Middle Eastern ancestries, and portray the European Jewish genome as a mosaic of Caucasus, European, and Semitic ancestries, thereby consolidating previous contradictory reports of Jewish ancestry.

Falk then noted the follow-up paper by Behar challenging Elhaik's results argued that the southern Caucasus populations, sampled by Elhaik were related to countries further south. The problem, he concluded, was that 'the risk of circularity of the argument is exposed: Geneticist determine the genotypic details of socio-ethnologists' classifications, whereas socio-demographers rely on geneticists findings to bolster their classifications.'[33]

References[]

  1. ^ Christine Kenneally, The Invisible History of the Human Race: How DNA and History Shape Our Identities and Our Futures, Penguin Books, 2014 ISBN 978-0-698-17629-4:'In 2011 Eran Elhaik was hired to solve one of the biggest jigsaw puzzles in the history of the human race. ‘Following the failed Human Genome Diversity Project, National Geographic launched the Genographic Project in 2005 to develop a way of reading people's Y chromosome and mttDNA). In 2011 Genographic decided to include all the chromosomes and analyse autosomal DNA as well. Elhaik was asked to design a method that would extract the most information from a sample but at the same time extract only historical information and not anything to do with an individual's health or features.'
  2. ^ "Dr Eran Elhaik". University of Sheffield.
  3. ^ Eran Elhaik, Lund University
  4. ^ Eran Elhaik – new senior lecturer
  5. ^ Elhaik, Eran; Graur, Dan; Josić, Krešimir; Landan, Giddy (2010). "Identifying compositionally homogeneous and nonhomogeneous domains within the human genome using a novel segmentation algorithm". Nucleic Acids Research. 38 (15): e158. doi:10.1093/nar/gkq532. PMC 2926622. PMID 20571085.
  6. ^ Elhaik, Eran; Zandi, Peter (2015). "Dysregulation of the NF-κB pathway as a potential inducer of bipolar disorder". Journal of Psychiatric Research. 70: 18–27. doi:10.1016/j.jpsychires.2015.08.009. PMID 26424419.
  7. ^ Elhaik, Eran (2016). "A 'Wear and Tear' Hypothesis to Explain Sudden Infant Death Syndrome". Frontiers in Neurology. 7: 180. doi:10.3389/fneur.2016.00180. PMC 5083856. PMID 27840622.
  8. ^ "Genome Biology and Evolution | Oxford Academic".
  9. ^ Chanda, P; Elhaik, E; Bader, JS (27 July 2012). "HapZipper: sharing HapMap populations just got easier". Nucleic Acids Research. 40 (20): e159. doi:10.1093/nar/gks709. PMC 3488212. PMID 22844100.
  10. ^ Conversations with Eran Elhaik: Tracking ancient migrations Scientific Inquirer 6 July 2017
  11. ^ Elhaik, E (1 January 2013). "The missing link of Jewish European ancestry: Contrasting the Rhineland and the Khazarian hypotheses". Genome Biology and Evolution. 5 (1): 61–74. doi:10.1093/gbe/evs119. PMC 3595026. PMID 23241444.
  12. ^ Das, R (19 April 2016). "Localizing Ashkenazic Jews to Primeval Villages in the Ancient Iranian Lands of Ashkenaz". Genome Biology and Evolution. 8 (7): 1132–49. doi:10.1093/gbe/evw046. PMC 4860683. PMID 26941229.
  13. ^ Elhaik, E (5 August 2016). "In search of the jüdische Typus: A Proposed Benchmark to Test the Genetic Basis of Jewishness Challenges Notions of "Jewish Biomarkers"". frontiers in Genetics. 7 (141): 141. doi:10.3389/fgene.2016.00141. PMC 4974603. PMID 27547215.
  14. ^ Elhaik, E (1 January 2013). "The missing link of Jewish European ancestry: Contrasting the Rhineland and the Khazarian hypotheses". Genome Biology and Evolution. 5 (1): 61–74. doi:10.1093/gbe/evs119. PMC 3595026. PMID 23241444.
  15. ^ Marshall, S (16 November 2016). "Reconstructing Druze population history". Scientific Reports. 6 (35837): 35837. Bibcode:2016NatSR...635837M. doi:10.1038/srep35837. PMC 5111078. PMID 27848937.
  16. ^ Keys, David (20 April 2016). "Scientists reveal Jewish history's forgotten Turkish roots". The Independent.
  17. ^ Ranajit Das, Paul Wexler, Mehdi Pirooznia and Eran Elhaik,'The Origins of Ashkenaz, Ashkenazic Jews, and Yiddish,'Frontiers in Genetics 21 June 2017
  18. ^ Elhaik, Eran; Tatarinova, Tatiana; Chebotarev, Dmitri; Piras, Ignazio S; Calò, Carla Maria; De Montis, Antonella; Atzori, Manuela; Marini, Monica; Tofanelli, Sergio; Francalacci, Paolo; Pagani, Luca; Tyler-Smith, Chris; Xue, Yali; Cucca, Francesco; Schurr, Theodore G.; Gaieski, Jill B.; Melendez, Carlalynne; Vilar, Miguel G.; Owings, Amanda C.; Gómez, Rocío; Fujita, Ricardo; Santos, Fabrício R.; Comas, David; Balanovsky, Oleg; Balanovska, Elena; Zalloua, Pierre; Soodyall, Himla; Pitchappan, Ramasamy; GaneshPrasad, ArunKumar; Hammer, Michael; Matisoo-Smith, Lisa; Wells, Spencer R.; The Genographic Consortium (2014). "Geographic population structure analysis of worldwide human populations infers their biogeographical origins". Nature Communications. 5: 3513. doi:10.1038/ncomms4513.
  19. ^ Jump up to: a b c Rubin, Rita (7 May 2013). "'Jews a Race' Genetic Theory Comes Under Fierce Attack by DNA Expert".
  20. ^ Behar, Doron M.; Mespalu, Mait; Baran, Yael; Kopelman, Naama M. S; Yunusbayev, Bayazit; Gladstein, Ariella; Tzur, Shay; Sahakyan, Hovhannes; Bahmanimehr, Ardeshir; Yepiskoposyan, Levon; Tambets, Kristiina; Khusnutdinova, Elza K.; Kushiniarevich, Alena; Balanovsky, Oleg; Balanovsky, Elena; Kovacevic, Lejla; Marjanovic, Damir; Mihailov, Evelin; Kouvasti, Anastasia; Triantaphylldis, Costas; King, Roy J.; Semino, Ornella; Torroni, Antonio; Hammer, Michael F.; Metspalu, Ene; Skorecki, Karl; Rosset, Saharon; Halperin, Eran; Willems, Richard; Rosenberg, Noah A. (2013). "No Evidence from Genome-Wide Data of a Khazar Origin for the Ashkenazi Jews". Human Biology. 85 (6): 859–900. doi:10.3378/027.085.0604.
  21. ^ Flegontov, Pavel; Kassian, Alexei; Thomas, Mark G.; Fedchenko, Valentina; Changmai, Piya; Starostin, George (2016). "Pitfalls of the Geographic Population Structure (GPS) Approach Applied to Human Genetic History: A Case Study of Ashkenazi Jews". Genome Biology and Evolution. 8 (7): 2259–2265. doi:10.1093/gbe/evw162.
  22. ^ Aptroot, Marion (2016). "Yiddish Language and Ashkenazic Jews: A Perspective from Culture, Language, and Literature". Genome Biology and Evolution. 8 (6): 1948–1949. doi:10.1093/gbe/evw131.
  23. ^ Thomas, Matthew (11 March 2013). "DNA ancestry tests not to be trusted, say experts". BioNews (Issue 696). Retrieved 29 April 2021.
  24. ^ Thomas, Matthew (6 May 2013). "Genetic ancestry test claims to find 'village where your DNA was formed'". BioNews (Issue 752). Retrieved 29 April 2021.
  25. ^ Thomas, Matthew (12 May 2014). "So many genes, so close to home". BioNews (Issue 753). Retrieved 29 April 2021.
  26. ^ Kutzik, Jordan (28 April 2016). "Don't Buy the Junk Science That Says Yiddish Originated in Turkey". The Forward. Retrieved 29 April 2021.
  27. ^ Liphshiz, Cnaan (3 May 2016). "Scholars dismiss theory tracing Ashkenazi Jews to Turkey". The Canadian Jewish News. Retrieved 29 April 2021.
  28. ^ Ostrer, Harry (11 September 2017). "How 23andMe Fell For Anti-Semitic 'Khazar' Canard". The Forward. Retrieved 29 April 2021.
  29. ^ Beider, Alexander (25 September 2017). "Ashkenazi Jews Are Not Khazars.Here's The Proof". The Forward. Retrieved 29 April 2021.
  30. ^ Aram Yardumian,Theodore G Schurr, 'The Geography of Jewish Ethnogenesis,' Journal of Anthropological Research Volume 75, Number 2 pp.206–234
  31. ^ Editorial: Population Genetics of Worldwide Jewish People, Frontiers in Genetics 28 July 2017
  32. ^ Eran Elhaik, 'Why most Principal Component Analyses (PCA) in population genetic studies are wrong,' 2021 (preprint)
  33. ^ Raphael Falk 's 'Genetic markers cannot determine Jewish descent,' Frontiers in Genetics, 2014; 5: 462, online 21 January 2015

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