Armatimonadota
| Armatimonadota | |
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| Phylum: | Armatimonadota Tamaki et al. 2021[1]
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Armatimonadota is a phylum of gram-negative bacteria.
History[]
Armatimonadota was originally described solely on the basis of environmental 16S rRNA gene clone sequences, and was temporarily titled candidate phylum OP10. However, in 2011 a bacterial strain belonging to the phylum was isolated from an aquatic plant in Japan. The species was named Armatimonas rosea and was the first member of its phylum, genus, and species.[2]
Members[]
Armatimonas rosea, an aerobic chemoheterotrophic bacterium, strain YO-36T, was isolated from rhizoplane of an aquatic plant (a reed, Phragmites australis) inhabiting a freshwater lake in Japan.[2]
Chthonomonas calidirosea, an aerobic, saccharolytic, obligately thermophilic, motile, non-spore-forming bacterium, strain T49(T), was isolated from geothermally heated soil at Hell's Gate, Tikitere, New Zealand.[3]
Phylogeny[]
| 16S rRNA-based LTP release 123 by The All-Species Living Tree Project.[4] | Annotree[5] and GTDB release 05-RS95 (17 July 2020).[6] | ||||||||||||||||||||||||||||||||||||||||||
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Taxonomy[]
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[7] and National Center for Biotechnology Information (NCBI).[8]
- Class Lee et al. 2011
- Order Lee et al. 2011
- Family Lee et al. 2011
- Genus Lee et al. 2011
- Species Chthonomonas calidirosea Lee et al. 2011
- Genus Lee et al. 2011
- Family Lee et al. 2011
- Order Lee et al. 2011
- Class Im et al. 2012
- Order Im et al. 2012
- Family Im et al. 2012
- Genus Im et al. 2012
- Species Fimbriimonas ginsengisoli Im et al. 2012
- Genus Im et al. 2012
- Family Im et al. 2012
- Order Im et al. 2012
- Class Tamaki et al. 2011
- Order Tamaki et al. 2011
- Family Tamaki et al. 2011
- Genus Tamaki et al. 2011
- Species Armatimonas rosea Tamaki et al. 2011
- Genus Tamaki et al. 2011
- Family Tamaki et al. 2011
- Order Li, Kudo & Tonouchi 2018
- Family Li, Kudo & Tonouchi 2018
- Genus Li, Kudo & Tonouchi 2018
- Species Li, Kudo & Tonouchi 2018
- Genus Li, Kudo & Tonouchi 2018
- Family Li, Kudo & Tonouchi 2018
- Order Tamaki et al. 2011
Notes[]
References[]
- ^ Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987.
- ^ a b Tamaki, Hideyuki; Tanaka, Yasuhiro; Matsuzawa, Hiroaki; Muramatsu, Mizuho; Meng, Xian-Ying; Hanada, Satoshi; Mori, Kazuhiro; Kamagata, Yoichi (2010). "Armatimonas rosea gen. nov., sp. nov., a Gram-negative, aerobic, chemoheterotrophic bacterium of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 6): 1442–7. doi:10.1099/ijs.0.025643-0. PMID 20622056.
- ^ Lee, Kevin C. Y.; Dunfield, Peter F.; Morgan, Xochitl C.; Crowe, Michelle A.; Houghton, Karen M.; Vyssotski, Mikhail; Ryan, Jason L. J.; Lagutin, Kirill; et al. (2010). "Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic microorganism of a novel bacterial class, Chthonomonadetes classis. nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 10): 2482–90. doi:10.1099/ijs.0.027235-0. PMID 21097641.
- ^ All-Species Living Tree Project."16S rRNA-based LTP release 123 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database. Retrieved 2014-03-20.
- ^ Mendler, K; Chen, H; Parks, DH; Hug, LA; Doxey, AC (2019). "AnnoTree: visualization and exploration of a functionally annotated microbial tree of life". Nucleic Acids Research. 47: 4442–4448. doi:10.1093/nar/gkz246. PMC 6511854.
- ^ cite website |title=GTDB release 05-RS95 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database
- ^ J.P. Euzéby. "Armatimonadetes". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2011-06-13. Retrieved 2016-03-20.
- ^ Sayers; et al. "Armatimonadetes". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.
External links[]
- Bacteria phyla